Hi Lee,
OP here (Work account rather than personal),
Are the ones not being crawled behind SSL? As far as we can make out, Cloudflare should fall over to support non SNI crawlers for all CF Pro and above accounts. It seem however that RogerBot is spoofing a modern
UA but not actually supporting modern SSL. The end result is that CF doesnt fall back properly and Moz can't crawl.
As i post this, im waiting on a Moz support response to a non SSL site behind CF thats not being crawled. Will post up if we work out what that is.